BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022E01LP1|AL427903
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1343 1755 0.0
>3x_Contig1343
Length = 6877
Score = 1755 bits (881), Expect = 0.0
Identities = 889/895 (99%)
Strand = Plus / Plus
Query: 1 gatccagagattcctttcgtatttgawtttccagatttggccagatcgagacttaagtaa 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5968 gatccagagattcctttcgtatttgaatttccagatttggccagatcgagacttaagtaa 6027
Query: 61 tcatttgcttttaactctggtggtacttacagatctagcgatctcattcggttcattgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6028 tcatttgcttttaactctggtggtacttacagatctagcgatctcattcggttcattgtc 6087
Query: 121 ccataaccggtgaagcaagcatgtaatttagaatctcgagacacatgcggcagcaatacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6088 ccataaccggtgaagcaagcatgtaatttagaatctcgagacacatgcggcagcaatacg 6147
Query: 181 tggagaagaggctaaaccgcttggtatcattttttttttttttaattttggcatttcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6148 tggagaagaggctaaaccgcttggtatcattttttttttttttaattttggcatttcgtg 6207
Query: 241 cttgaataatgtctgagcttctttaggttcagcagtttgggaatacattctaaacaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6208 cttgaataatgtctgagcttctttaggttcagcagtttgggaatacattctaaacaagaa 6267
Query: 301 tttgaagaaattacctttgtttgaaacagaggctgttctatatttagcttttattattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6268 tttgaagaaattacctttgtttgaaacagaggctgttctatatttagcttttattattct 6327
Query: 361 tctagctatttttgtgtttttttggctagttggcgatgcttcgaacgtgtgttggtgaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6328 tctagctatttttgtgtttttttggctagttggcgatgcttcgaacgtgtgttggtgaga 6387
Query: 421 gaatcttacttcataagtctttcaattcttacctatagtagtaagtgaaattccagattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6388 gaatcttacttcataagtctttcaattcttacctatagtagtaagtgaaattccagattc 6447
Query: 481 agtatttctcgaagcaaggcagttcagcatgcmatttaaagttcaatacgcctggrcttg 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 6448 agtatttctcgaagcaaggcagttcagcatgcaatttaaagttcaatacgcctggacttg 6507
Query: 541 gtaataagccawaagcgattacmgcttcttgtgatgctgaatgaatctaatatataaagg 600
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6508 gtaataagccataagcgattacagcttcttgtgatgctgaatgaatctaatatataaagg 6567
Query: 601 gagcgtttgttatctggtaagatcacaatttctcatctaaactcggcttatacgtatatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6568 gagcgtttgttatctggtaagatcacaatttctcatctaaactcggcttatacgtatatt 6627
Query: 661 cattattatatgttctctctcctaacagctgcaatatacaagatcaatagtttcattcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6628 cattattatatgttctctctcctaacagctgcaatatacaagatcaatagtttcattcac 6687
Query: 721 actagccaccaaattaatataacaacacaataatgtcttttgcctcaatctctctagtac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6688 actagccaccaaattaatataacaacacaataatgtcttttgcctcaatctctctagtac 6747
Query: 781 aagcacaagccgtcgctgcctcctctgtttcctcatctgcctcctctgctgttggcttag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6748 aagcacaagccgtcgctgcctcctctgtttcctcatctgcctcctctgctgttggcttag 6807
Query: 841 ttgggaacggtggttccagtaccattgaaacgagctctggtgctgaatctactgg 895
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6808 ttggaaacggtggttccagtaccattgaaacgagctctggtgctgaatctactgg 6862
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,553
Number of Sequences: 1807
Number of extensions: 15553
Number of successful extensions: 432
Number of sequences better than 1.0e-20: 1
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)